GL1X · GenesisL1 explorer

Ligand · VDB

VDB · (1R,2S,3R,5Z,7E)-17-{(1R)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethoxy)-9,10-secoestra-5,7,16-triene-1,3-diol

VDB, (1R,2S,3R,5Z,7E)-17-{(1R)-1-[(2-ethyl-2-hydroxybutyl)sulfanyl]ethyl}-2-(2-hydroxyethoxy)-9,10-secoestra-5,7,16-triene-1,3-diol (C28 H46 O5 S, 494.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
VDB
Formula
C28 H46 O5 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

VDB in 2 structures; the first of them:

  • 2ZLA · 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs… · VDB A500 · binds THR142, TYR143, ASP144, TYR147, PHE150, LEU223, LEU226, ALA227 and 23 more
  • 2ZLA · 2-substituted-16-ene-22-thia-1ALPHA,25-dihydroxy-26,27- dimethyl-19-norvitamin D3… · VDB A500 · binds THR142, TYR143, ASP144, TYR147, PHE150, LEU223, LEU226, ALA227 and 23 more

Residues it binds most

LEU 2, TYR 2, SER 2, ALA 2, HIS 2, ILE 2, PHE 2, VAL 2, ARG 2, ASP 2 (residue and the binding sites it lines).

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