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Ligand · VD2

VD2 · 5-{2-[1-(5-hydroxy-1,5-dimethyl-hexyl)-7A-methyl-octahydro-inden-4-ylidene]-ethylidene}-2-methyl-cyclohexane-1,3-diol

VD2, 5-{2-[1-(5-hydroxy-1,5-dimethyl-hexyl)-7A-methyl-octahydro-inden-4-ylidene]-ethylidene}-2-methyl-cyclohexane-1,3-diol (C27 H46 O3, 418.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
VD2
Formula
C27 H46 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

VD2 in 2 structures; the first of them:

  • 1RKH · crystal structure of the rat vitamin D receptor ligand binding domain complexed with… · VD2 A500 · binds TYR143, TYR147, PHE150, LEU223, LEU226, LEU229, VAL230, SER233 and 20 more
  • 1RKH · Crystal structure of the rat vitamin D receptor ligand binding domain complexed with… · VD2 A500 · binds TYR143, TYR147, PHE150, LEU223, LEU226, LEU229, VAL230, SER233 and 20 more

Residues it binds most

LEU 2, TYR 2, SER 2, VAL 2, HIS 2, ILE 2, PHE 2, ALA 2, ARG 2, CYS 2 (residue and the binding sites it lines).

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