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Ligand · VCW

VCW · [(2S,3S,4S,5R,6S)-6-[(2R)-2,3-bis(oxidanyl)propoxy]-3, 4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid

VCW, [(2S,3S,4S,5R,6S)-6-[(2R)-2,3-bis(oxidanyl)propoxy]-3, 4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid (C9 H18 O10 S, 318.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with…

Component
VCW
Formula
C9 H18 O10 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

VCW in 4 structures; the first of them:

  • 7OFX · Crystal structure of a GH31 family sulfoquinovosidase mutant D455N from Agrobacterium… · VCW A701 · binds GLU135, GLU270, PHE280, ARG283, LEU284, TRP286, TYR315, MET386 and 8 more
  • 7OFY · Crystal structure of SQ binding protein from Agrobacterium tumefaciens in complex with… · VCW A401 · binds GLN12, HIS13, ASN41, THR42, SER43, GLU44, ASP67, VAL68 and 13 more
  • 7OFX · Crystal structure of a GH31 family sulfoquinovosidase mutant D455N from agrobacterium… · VCW A701 · binds GLU135, GLU270, PHE280, ARG283, LEU284, TRP286, TYR315, MET386 and 8 more
  • 7OFY · Crystal structure of sq binding protein from agrobacterium tumefaciens in complex with… · VCW A401 · binds GLN12, HIS13, THR42, SER43, ASP67, PHE111, ASP113, ILE164 and 10 more

Residues it binds most

TYR 12, TRP 12, ARG 12, GLU 12, PHE 12, ASP 12, GLY 4, HIS 12, LEU 12, ASN 10 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol

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