Ligand · VCP

VCP · (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methylidene)-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine

VCP, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methylidene)-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine (C19 H20 N3 O8 P, 449.4 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry).…

Component: VCP
Formula: C19 H20 N3 O8 P
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

VCP in 1 structure; the first of them:

6XRH · Salmonella typhimurium tryptophan synthase complexed with oxindolyl-L- alanine and… · VCP B401 · binds ALA85, HIS86, LYS87, GLU109, THR110, GLY111, ALA112, GLY113 and 18 more

Residues it binds most

GLY 1, ALA 1, GLU 1, HIS 1, LEU 1, SER 1, THR 1, ASN 1, CYS 1, GLN 1 (residue and the binding sites it lines).

Found with

1GP · Sn-glycerol-1-phosphate
VCS · 4-[(E)-({1-carboxy-2-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]ethan-1-id-1-yl}iminio)methyl]-2-methyl-5-[(phosphonooxy)methyl]pyridin-1-ium-3-olate
NA · Sodium ion
DMS · Dimethyl sulfoxide

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