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Ligand · V8Z

V8Z · (1E,4E,8E)-2,6,6,9-Tetramethyl-1,4-8-cycloundecatriene

V8Z, (1E,4E,8E)-2,6,6,9-Tetramethyl-1,4-8-cycloundecatriene (C15 H24, 204.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
V8Z
Formula
C15 H24
Class
ligand
Structures
2
PDB entries
1

Binding sites

V8Z in 2 structures; the first of them:

  • 7OC4 · Alpha-humulene synthase AsR6 from Sarocladium schorii in complex with thiolodiphosphate… · V8Z A504 · binds TRP138, TRP142, ALA160, ALA161, ASP164, GLN212, GLN216, THR243 and 10 more
  • 7OC4 · Alpha-humulene synthase ASR6 from sarocladium schorii in complex with thiolodiphosphate… · V8Z A504 · binds TRP138, TRP142, ALA160, ALA161, ASP164, GLN216, THR243, ALA244 and 8 more

Residues it binds most

ALA 4, TYR 4, GLN 4, THR 4, TRP 4, ARG 4, ASN 4, ASP 4, CYS 4, LEU 4 (residue and the binding sites it lines).

Found with

  • PIS · Trihydrogen thiodiphosphate
  • MG · Magnesium ion
  • ZN · Zinc ion
  • BU3 · (R,R)-2,3-butanediol
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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