GL1X · GenesisL1 explorer

Ligand · V8U

V8U · 3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid

V8U, 3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid (C33 H38…

Component
V8U
Formula
C33 H38 N4 O6
Class
ligand
Structures
2
PDB entries
2

Binding sites

V8U in 2 structures; the first of them:

  • 8CO5 · The surface-engineered photosensory module (PAS-GAF-PHY) of the bacterial phytochrome… · V8U A601 · binds CYS20, GLU23, ILE25, LEU164, TYR166, TYR188, PHE193, GLY196 and 25 more
  • 8Y33 · A near-infrared fluorescent protein of de novo backbone design · V8U A301 · binds PHE47, ALA51, SER54, MET55, TRP105, LEU111, ILE117, ALA118 and 17 more

Residues it binds most

ILE 2, LEU 2, MET 2, SER 2, ARG 2, ALA 2, TYR 1, ASP 2, CYS 2, HIS 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion

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