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Ligand · V8H

V8H · [[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonyl-4~{H}-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4,5-tris(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate

V8H, [[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonyl-4~{H}-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4,5-tris(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate (C16 H26 N2 O15 P2…

Component
V8H
Formula
C16 H26 N2 O15 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

V8H in 2 structures; the first of them:

  • 7OCQ · NADH bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate… · V8H A801 · binds GLY251, PHE252, GLY253, ALA254, ILE255, GLY256, THR280, ARG281 and 15 more
  • 7OCQ · NADH bound to the dehydrogenase domain of the bifunctional mannitol-1- phosphate… · V8H A801 · binds GLY251, PHE252, GLY253, ALA254, ILE255, THR280, ARG281, CYS335 and 11 more

Residues it binds most

GLY 2, ARG 2, ILE 2, LEU 2, VAL 2, ASN 2, GLU 2, ALA 2, CYS 2, LYS 2 (residue and the binding sites it lines).

Found with

  • NAI · 1,4-dihydronicotinamide adenine dinucleotide
  • MG · Magnesium ion
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
  • GOL · Glycerol

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