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Ligand · V6P

V6P · 3-phenoxyphenol

V6P, 3-phenoxyphenol (C12 H10 O2, 186.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
V6P
Formula
C12 H10 O2
Class
ligand
Structures
2
PDB entries
2

Binding sites

V6P in 2 structures; the first of them:

  • 6XQ6 · Receptor for advanced glycation end products VC1 domain in complex with fragment 11 · V6P A306 · binds ASP73, ARG77, PHE85, PRO87, ASP73, ARG77, LEU79, PHE85 and 1 more
  • 6XQ8 · Receptor for advanced glycation end products VC1 domain in complex with fragments 1 & 11 · V6P A306 · binds GLN47, ARG48, LEU49, GLU50, SER65, PRO66, GLN100

Residues it binds most

ARG 6, PRO 4, GLN 4, LEU 5, ASP 2, GLU 4, PHE 2, ALA 3, MET 2, SER 2 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • ACT · Acetate ion
  • V6M · 7-methyl-3-phenyl-1H-indole-2-carboxylic acid

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