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Ligand · V5X

V5X · (2R)-N~8~-hydroxy-2-{[(5-methoxy-2-methyl-1H-indol-3-yl)acetyl]amino}-N~1~-[2-(2-phenyl-1H-indol-3-yl)ethyl]octanediamide

V5X, (2R)-N~8~-hydroxy-2-{[(5-methoxy-2-methyl-1H-indol-3-yl)acetyl]amino}-N~1~-[2-(2-phenyl-1H-indol-3-yl)ethyl]octanediamide (C36 H41 N5 O5, 623.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
V5X
Formula
C36 H41 N5 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

V5X in 2 structures; the first of them:

  • 2V5X · Crystal structure of HDAC8-inhibitor complex · V5X A1380 · binds ASP101, HIS142, HIS143, GLY151, PHE152, ASP178, HIS180, GLY206 and 14 more
  • 2V5X · Crystal structure of HDAC8-inhibitor complex · V5X A1380 · binds ASP101, HIS142, HIS143, GLY151, PHE152, ASP178, HIS180, GLY206 and 14 more

Residues it binds most

GLY 4, PHE 4, ASP 4, HIS 4, PRO 4, TYR 4, LYS 4, MET 2, ALA 2, LEU 2 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • ZN · Zinc ion

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