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Ligand · V2D

V2D · methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate

V2D, methyl 2-[(3-hydroxy-2-methylphenoxy)methyl]pyridine-3-carboxylate (C15 H15 N O4, 273.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues…

Component
V2D
Formula
C15 H15 N O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

V2D in 2 structures; the first of them:

  • 6XE7 · Carbonmonoxy hemoglobin in complex with the antisickling agent methyl… · V2D A203 · binds VAL1, LEU2, VAL73, ASP74, ASP75, MET76, PRO77, SER131 and 3 more
  • 6XE7 · Carbonmonoxy hemoglobin in complex with the antisickling agent methyl… · V2D A203 · binds VAL1, VAL73, ASP74, MET76, PRO77, SER131, THR134, THR134

Residues it binds most

VAL 4, THR 4, ASP 3, MET 4, PRO 4, SER 4, LEU 3, ALA 1 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • CMO · Carbon monoxide

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