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Ligand · URK

URK · [(1S)-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate

URK, [(1S)-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate (C20 H20 N2 O7, 400.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
URK
Formula
C20 H20 N2 O7
Class
ligand
Structures
2
PDB entries
1

Binding sites

URK in 2 structures; the first of them:

  • 7NT2 · Crystal structure of SARS CoV2 main protease in complex with FSP006 · URK B604 · binds SER1, HIS41, MET49, LEU141, ASN142, GLY143, SER144, CYS145 and 7 more
  • 7NT2 · Crystal structure of SARS COV2 main protease in complex with FSP006 · URK B604 · binds SER1, HIS41, MET49, LEU141, ASN142, GLY143, SER144, CYS145 and 7 more

Residues it binds most

HIS 2, MET 2, SER 2, ARG 2, ASN 2, ASP 2, CYS 2, GLN 2, GLU 2, GLY 2 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • DMS · Dimethyl sulfoxide
  • PEG · Di(hydroxyethyl)ether

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