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Ligand · URB

URB · 5-bromopyrimidine-2,4(1H,3H)-dione

URB, 5-bromopyrimidine-2,4(1H,3H)-dione (C4 H3 Br N2 O2, 191.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
URB
Formula
C4 H3 Br N2 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

URB in 2 structures; the first of them:

  • 3CXM · Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil · URB A401 · binds GLY204, GLN205, ASP206, PRO207, TYR208, LEU217, CYS218, PHE219 and 3 more
  • 3CXM · Leishmania naiffi uracil-DNA glycosylase in complex with 5-bromouracil · URB A401 · binds GLY204, GLN205, ASP206, PRO207, TYR208, LEU217, CYS218, PHE219 and 3 more

Residues it binds most

ASN 2, ASP 2, CYS 2, GLN 2, GLY 2, HIS 2, LEU 2, PHE 2, PRO 2, SER 2 (residue and the binding sites it lines).

Found with

  • URA · Uracil
  • BR · Bromide ion
  • GOL · Glycerol

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