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Ligand · UML

UML · Uridine 5'Diphospho N-acetyl muramoyl-L-Alanyl-D-Glutamyl-L-Lysine

UML, Uridine 5'Diphospho N-acetyl muramoyl-L-Alanyl-D-Glutamyl-L-Lysine (C34 H55 N7 O24 P2, 1007.8 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the…

Component
UML
Formula
C34 H55 N7 O24 P2
Class
ligand
Structures
4
PDB entries
2

Binding sites

UML in 4 structures; the first of them:

  • 4C12 · X-ray Crystal Structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys and ADP · UML A1498 · binds THR28, ASP29, SER30, ARG31, PHE39, SER42, GLY44, TYR45 and 22 more
  • 4C13 · x-ray crystal structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys · UML A598 · binds THR28, ASP29, SER30, ARG31, PHE39, SER42, GLY44, TYR45 and 23 more
  • 4C12 · X-ray crystal structure of staphylococcus aureus mure with udp-murnac-ala-glu-lys and ADP · UML A1498 · binds THR28, ASP29, SER30, ARG31, PHE39, SER42, GLY44, TYR45 and 22 more
  • 4C13 · X-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys · UML A598 · binds THR28, ASP29, SER30, ARG31, PHE39, SER42, GLY44, TYR45 and 23 more

Residues it binds most

SER 4, THR 4, ARG 4, HIS 4, ALA 4, ASN 4, ASP 4, GLU 4, PHE 4, TYR 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ADP · Adenosine-5'-diphosphate
  • K · Potassium ion
  • CL · Chloride ion
  • PO4 · Phosphate ion
  • GOL · Glycerol

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