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Ligand · UKU

UKU · [(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]oxy-N-[9-[(2R,3S,5R)-5-[[[(2R,3S)-4-methyl-2,3-bis(oxidanyl)pentanoyl]amino]-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxolan-2-yl]purin-6-yl]phosphonamidic acid

UKU, [(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]oxy-N-[9-[(2R,3S,5R)-5-[[[(2R,3S)-4-methyl-2,3-bis(oxidanyl)pentanoyl]amino]-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxolan-2-yl]purin-6-yl]phosphonamidic acid (C21 H34 N6…

Component
UKU
Formula
C21 H34 N6 O16 P2
Class
ligand
Structures
2
PDB entries
2

Binding sites

UKU in 2 structures; the first of them:

  • 8CAW · PBP AccA from A. tumefaciens Bo542 in complex with agrocin84 · UKU A602 · binds PRO44, ILE52, SER53, ASN54, PHE145, TRP178, TYR375, TYR376 and 12 more
  • 8CJU · PBP AccA from A. vitis S4 in complex with agrocin84 · UKU A601 · binds VAL44, ILE52, SER53, ASN54, TYR145, TRP178, ASN284, MET372 and 13 more

Residues it binds most

TRP 2, ASN 2, TYR 2, ARG 2, SER 2, GLU 2, THR 2, GLY 2, ILE 2, ALA 1 (residue and the binding sites it lines).

Found with

  • C84 · [(2R,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]oxy-N-[9-[(2R,3S,5R)-5-[[[(2R,3S)-4-methyl-2,3-bis(oxidanyl)pentanoyl]amino]-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxolan-2-yl]purin-6-yl]phosphonamidic acid
  • EDO · 1,2-ethanediol

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