Ligand · UD9

UD9 · (2R,3S,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name)

UD9, (2R,3S,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name) (C17 H27 N3 O17 P2, 607.4…

Component: UD9
Formula: C17 H27 N3 O17 P2
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

UD9 in 2 structures; the first of them:

7N41 · Crystal structure of TagA with UDP-ManNAc · UD9 A300 · binds ASN39, GLU41, ILE42, MET45, ASP65, GLY108, ALA109, ALA110 and 11 more
7N41 · Crystal structure of taga with udp-mannac · UD9 A300 · binds ASN39, ASP65, ALA109, ALA110, GLY136, TYR137, ALA161, LEU162 and 7 more

Residues it binds most

GLY 6, ALA 6, ASP 6, ASN 6, GLN 6, LEU 6, LYS 4, TYR 6, GLU 5, MET 4 (residue and the binding sites it lines).

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