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Ligand · UD7

UD7 · [(2R,3R,4R,6R)-3-acetamido-6-methyl-4-oxidanyl-5-oxidanylidene-oxan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate

UD7, [(2R,3R,4R,6R)-3-acetamido-6-methyl-4-oxidanyl-5-oxidanylidene-oxan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate (C17 H25 N3 O16 P2, 589.3…

Component
UD7
Formula
C17 H25 N3 O16 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

UD7 in 2 structures; the first of them:

  • 4G5H · Crystal structure of capsular polysaccharide synthesizing enzyme CapE from Staphylococcus… · UD7 A402 · binds LYS84, GLN85, VAL86, PRO87, LYS126, MET134, ASN166, SER170 and 12 more
  • 4G5H · Crystal structure of capsular polysaccharide synthesizing enzyme cape from staphylococcus… · UD7 A402 · binds LYS84, GLN85, VAL86, PRO87, LYS126, MET134, ASN166, SER170 and 12 more

Residues it binds most

SER 4, THR 4, TYR 2, VAL 2, ARG 2, ASN 4, GLU 4, LYS 2, MET 2, ASP 2 (residue and the binding sites it lines).

Found with

  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
  • NA · Sodium ion
  • FMT · Formic acid

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