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Ligand · UD0

UD0 · (2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(S)-{[(S)-{[(2S,3R,4S,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid

UD0, (2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(S)-{[(S)-{[(2S,3R,4S,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methy…

Component
UD0
Formula
C25 H34 N5 O22 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

UD0 in 2 structures; the first of them:

  • 3NUB · WbpE, an Aminotransferase from Pseudomonas aeruginosa Involved in O-antigen Assembly in… · UD0 A400 · binds GLU3, PHE4, ILE5, LEU7, ASN58, GLY59, THR60, LEU63 and 24 more
  • 3NUB · Wbpe, an aminotransferase from pseudomonas aeruginosa involved in O- antigen assembly in… · UD0 A400 · binds GLU3, PHE4, ILE5, LEU7, ASN58, GLY59, THR60, LEU63 and 24 more

Residues it binds most

THR 4, ALA 4, GLN 4, GLY 4, TYR 4, ASN 4, HIS 4, PHE 4, SER 4, LEU 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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