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Ligand · U9V

U9V · pentadecyl(tetradecyl)peroxyanhydride

U9V, pentadecyl(tetradecyl)peroxyanhydride (C33 H64 O4, 524.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
U9V
Formula
C33 H64 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

U9V in 2 structures; the first of them:

  • 6WTI · The Cryo-EM structure of the ubiquinol oxidase from Escherichia coli · U9V A1008 · binds TYR43, LEU44, TRP48, ILE59, MET60, ILE62, ILE63, ILE66 and 14 more
  • 6WTI · The cryo-EM structure of the ubiquinol oxidase from escherichia COLI · U9V A1008 · binds TYR43, LEU44, TRP48, MET60, ILE62, ILE63, ILE66, LEU125 and 7 more

Residues it binds most

ILE 2, TRP 2, LEU 2, MET 2, PHE 2, ARG 2, TYR 2, VAL 2, ALA 1 (residue and the binding sites it lines).

Found with

  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • HEM · Protoporphyrin IX containing Fe
  • HEO · Heme O
  • UQ8 · Ubiquinone-8
  • CU · Copper (II) ion

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