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Ligand · TV8

TV8 · (2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-4-methoxy-5-[6-(methylamino)purin-9-yl]oxolan-3-ol

TV8, (2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-4-methoxy-5-[6-(methylamino)purin-9-yl]oxolan-3-ol (C12 H17 N5 O4, 295.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
TV8
Formula
C12 H17 N5 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

TV8 in 2 structures; the first of them:

  • 7BIK · Crystal structure of YTHDF2 in complex with m6Am · TV8 B602 · binds GLY463, LYS416, SER417, TYR418, SER419, ASP422, TRP432, CYS433 and 8 more
  • 7BIK · Crystal structure of YTHDF2 in complex with M6AM · TV8 B602 · binds GLY463, LYS416, SER417, TYR418, SER419, ASP422, TRP432, CYS433 and 7 more

Residues it binds most

TRP 2, SER 2, ASP 2, LYS 2, ARG 2, ASN 2, CYS 2, GLY 2, THR 2, TYR 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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