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Ligand · TTT

TTT · 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide

TTT, 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide (C20 H20 N2 O, 304.4 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
TTT
Formula
C20 H20 N2 O
Class
ligand
Structures
7
PDB entries
5

Binding sites

TTT in 7 structures; the first of them:

  • 7CJM · SARS CoV-2 PLpro in complex with GRL0617 · TTT B401 · binds LEU162, GLY163, ASP164, GLU167, MET208, PRO247, PRO248, TYR264 and 4 more
  • 7JRN · Crystal structure of the wild type SARS-CoV-2 papain-like protease (PLPro) with inhibitor… · TTT A401 · binds LEU162, GLY163, ASP164, GLU167, PRO247, PRO248, TYR264, TYR268 and 3 more
  • 7CJM · SARS cov-2 plpro in complex with GRL0617 · TTT B401 · binds LEU162, GLY163, ASP164, GLU167, PRO247, PRO248, TYR264, TYR268 and 2 more
  • 7CMD · Crystal structure of the SARS-cov-2 plpro with GRL0617 · TTT A601 · binds LEU162, GLY163, ASP164, PRO247, PRO248, TYR264, TYR268, GLN269 and 2 more
  • 7JIR · The crystal structure of papain-like protease of SARS cov-2 , C111S mutant, in complex… · TTT A501 · binds LEU162, GLY163, ASP164, GLU167, PRO247, PRO248, TYR264, TYR268 and 3 more
  • 7JRN · Crystal structure of the wild type SARS-cov-2 papain-like protease (plpro) with inhibitor… · TTT A401 · binds LEU162, GLY163, ASP164, GLU167, PRO247, PRO248, TYR264, TYR268 and 3 more
  • 7SKQ · Btscov-RF1.2004 papain-like protease bound to the non-covalent inhibitor grl-0617 · TTT A403 · binds LEU163, GLY164, ASP165, GLU168, PRO249, TYR265, TYR269, GLN270 and 2 more

Residues it binds most

TYR 13, PRO 13, GLY 13, ASP 13, GLN 13, LEU 13, THR 12, GLU 8, ASN 1, LYS 1 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • CL · Chloride ion
  • ACT · Acetate ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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