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Ligand · TSP

TSP · 3'-thio-thymidine-5'-phosphate

TSP, 3'-thio-thymidine-5'-phosphate (C10 H15 N2 O7 P S, 338.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
TSP
Formula
C10 H15 N2 O7 P S
Class
ligand
Structures
4
PDB entries
2

Binding sites

TSP in 4 structures; the first of them:

  • 3L4J · Topoisomerase II-DNA cleavage complex, apo · TSP D11 · binds GLU449, GLY476, LYS477, ASP530, ILE534, HIS735, HIS736, GLY737 and 7 more
  • 3L4K · Topoisomerase II-DNA cleavage complex, metal-bound · TSP D11 · binds GLU449, GLY476, LYS477, ASP526, ASP530, LYS603, HIS735, HIS736 and 8 more
  • 3L4J · Topoisomerase II-DNA cleavage complex, apo · TSP D11 · binds GLU449, GLY476, LYS477, ASP530, ILE534, HIS735, HIS736, GLY737 and 7 more
  • 3L4K · Topoisomerase II-DNA cleavage complex, metal-bound · TSP D11 · binds GLU449, GLY476, LYS477, ASP526, ASP530, LYS603, HIS735, HIS736 and 8 more

Residues it binds most

DA 4, DT 4, GLY 4, HIS 4, ASP 4, LYS 4, DC 4, DG 4, GLU 4, ILE 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion

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