Ligand · TNT
TNT · 1,3-bis(amidinophenoxy)propane
TNT, 1,3-bis(amidinophenoxy)propane (C17 H20 N4 O2, 312.4 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- TNT
- Formula
- C17 H20 N4 O2
- Class
- ligand
- Structures
- 5
- PDB entries
- 2
Binding sites
TNT in 5 structures; the first of them:
- 102D · Sequence-dependent drug binding to the minor groove of DNA: the crystal structure of the… · TNT B25 · binds DA6, DT7, DT8, DT9, DG10, DA17, DA18, DT19 and 2 more
- 102D · Sequence-dependent drug binding to the minor groove of DNA: the crystal structure of the… · TNT B25 · binds DA6, DT7, DT8, DT9, DG10, DA17, DA18, DT19 and 2 more
- 1PRP · Crystal structure of D(CGCGAATTCGCG) complexed with propamidine, a short-chain homologue… · TNT A25 · binds DA5, DA6, DT7, DT8, DC9, DG10, DG16, DA17 and 4 more
- 102D · Sequence-dependent drug binding to the minor groove of DNA: the crystal structure of the… · TNT B25 · binds DA6, DT7, DT8, DT9, DG10, DA17, DA18, DT19 and 2 more
- 1PRP · Crystal structure of D(CGCGAATTCGCG) complexed with propamidine, a short-chain homologue… · TNT A25 · binds DA5, DA6, DT7, DT8, DC9, DG10, DG16, DA17 and 4 more
Residues it binds most
DT 5, DA 5, DG 5, DC 2 (residue and the binding sites it lines).
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