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Ligand · TNL

TNL · 2,4,6-trinitrotoluene

TNL, 2,4,6-trinitrotoluene (C7 H5 N3 O6, 227.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TNL
Formula
C7 H5 N3 O6
Class
ligand
Structures
6
PDB entries
3

Binding sites

TNL in 6 structures; the first of them:

  • 1GVR · Structure of pentaerythritol tetranitrate reductase and complexed with 2,4,6… · TNL A500 · binds THR26, ALA58, TYR68, TRP102, HIS181, HIS184, TYR186, ASP274 and 2 more
  • 4AB4 · Structure of Xenobiotic Reductase B from Pseudomonas putida in complex with TNT · TNL A1357 · binds HIS173, ASN176, TYR178, ALA232, HIS233, ARG262, GLU286
  • 4AEO · Structure of Xenobiotic Reductase B from Pseudomonas putida in complex with TNT · TNL A1355 · binds HIS173, ASN176, TYR178, ALA232, HIS233, ARG262
  • 1GVR · Structure of pentaerythritol tetranitrate reductase and complexed with 2,4,6… · TNL A500 · binds THR26, ALA58, TYR68, TRP102, HIS181, HIS184, TYR186, ASP274 and 2 more
  • 4AB4 · Structure of xenobiotic reductase B from pseudomonas putida in complex with tnt · TNL A1357 · binds HIS173, ASN176, TYR178, ALA232, HIS233, ARG262, GLU286
  • 4AEO · Structure of xenobiotic reductase B from pseudomonas putida in complex with tnt · TNL A1355 · binds HIS173, ASN176, TYR178, ALA232, HIS233, ARG262

Residues it binds most

HIS 10, TYR 10, ALA 10, ASN 8, ARG 6, THR 4, TRP 4, ASP 2, GLN 2, GLU 2 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • EDO · 1,2-ethanediol

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