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Ligand · TME

TME · Propane

TME, Propane (C3 H8, 44.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TME
Formula
C3 H8
Class
ligand
Structures
5
PDB entries
3

Binding sites

TME in 5 structures; the first of them:

  • 4XG1 · Psychromonas ingrahamii diaminopimelate decarboxylase with LLP · TME A507 · binds GLU126, SER127, ILE128, SER129, ILE174, LEU293, LYS294, LEU295
  • 6IUR · A phosphatase complex STRN3-PP2Aa · TME B601 · binds GLU23
  • 7M5L · PCNA bound to peptide mimetic with linker · TME E101 · binds CYS3, SER5, CYS8, PHE9
  • 6IUR · A phosphatase complex STRN3-PP2AA · TME B601 · binds GLU23
  • 7M5L · PCNA bound to peptide mimetic with linker · TME E101 · binds CYS3, CYS8, PHE9

Residues it binds most

CYS 6, SER 7, GLU 7, TYR 7, LEU 5, LYS 6, ILE 4, ASP 4, ALA 3, PHE 3 (residue and the binding sites it lines).

Found with

  • LLP · (2S)-2-amino-6-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]hexanoic acid
  • K · Potassium ion
  • NH2 · Amino group
  • SCN · Thiocyanate ion

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