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Ligand · TGD

TGD · 1-deoxy-D-tagatose

TGD, 1-deoxy-D-tagatose (C6 H12 O5, 164.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TGD
Formula
C6 H12 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

TGD in 2 structures; the first of them:

  • 4YTQ · Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex… · TGD A402 · binds PHE7, GLU35, SER66, ILE67, LEU108, TRP113, GLU152, VAL154 and 6 more
  • 4YTQ · Crystal structure of D-tagatose 3-epimerase C66S from pseudomonas cichorii in complex… · TGD A402 · binds PHE7, GLU35, SER66, ILE67, LEU108, TRP113, GLU152, VAL154 and 6 more

Residues it binds most

GLU 2, HIS 2, ARG 2, ASP 2, ILE 2, LEU 2, PHE 2, SER 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • TGY · 1-deoxy-alpha-D-tagatopyranose
  • MN · Manganese (II) ion

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