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Ligand · TBD

TBD · 2*-deoxy-thymidine-5*-alpha borano diphosphate (isomer rp)

TBD, 2*-deoxy-thymidine-5*-alpha borano diphosphate (isomer rp) (C10 H19 B N2 O10 P2, 400.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
TBD
Formula
C10 H19 B N2 O10 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

TBD in 2 structures; the first of them:

  • 1F6T · Structure of the nucleoside diphosphate KINASE/ALPHA-BORANO(RP)-TDP.MG complex · TBD A160 · binds LYS16, TYR56, HIS59, PHE64, LEU68, ARG92, VAL97, THR98 and 5 more
  • 1F6T · Structure of the nucleoside diphosphate KINASE/ALPHA-BORANO(RP)-TDP.MG complex · TBD A160 · binds LYS16, TYR56, HIS59, PHE64, LEU68, ARG92, VAL97, THR98 and 5 more

Residues it binds most

ARG 6, VAL 6, ASN 6, GLU 6, GLY 6, HIS 6, LEU 6, LYS 6, PHE 6, THR 6 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion

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