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Ligand · T25

T25 · (9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid

T25, (9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid (C18 H32 O3, 296.4 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
T25
Formula
C18 H32 O3
Class
ligand
Structures
6
PDB entries
3

Binding sites

T25 in 6 structures; the first of them:

  • 2RCL · Crystal Structure of Arabidopsis thaliana Allene Oxide Synthase (AOS, cytochrome P450… · T25 A601 · binds PHE137, VAL247, LEU251, LEU254, PHE320, ASN321, GLY324, GLY325 and 6 more
  • 3DSK · Crystal Structure of Arabidopsis thaliana Allene Oxide Synthase variant (F137L)… · T25 A601 · binds LEU137, THR138, VAL247, LEU251, LEU255, PHE320, ASN321, GLY324 and 7 more
  • 4CQ6 · The crystal structure of the allene oxide cyclase 2 from Arabidopsis thaliana with bound… · T25 B1189 · binds GLU23, PRO32, ILE34, PHE43, VAL49, PHE51, ASN53, CYS71 and 9 more
  • 2RCL · Crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome P450… · T25 A601 · binds PHE137, VAL247, LEU251, LEU254, PHE320, ASN321, GLY324, GLY325 and 6 more
  • 3DSK · Crystal structure of arabidopsis thaliana allene oxide synthase variant (F137L)… · T25 A601 · binds LEU137, THR138, VAL247, LEU251, LEU255, PHE320, ASN321, GLY324 and 7 more
  • 4CQ6 · The crystal structure of the allene oxide cyclase 2 from arabidopsis thaliana with bound… · T25 B1189 · binds GLU23, PRO32, ILE34, PHE43, VAL49, PHE51, ASN53, CYS71 and 9 more

Residues it binds most

LEU 8, PHE 8, TYR 4, PRO 8, VAL 8, ALA 8, ASN 8, GLY 4, ILE 8, THR 4 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • GOL · Glycerol
  • PO4 · Phosphate ion
  • MRD · (4R)-2-methylpentane-2,4-diol
  • OCT · N-octane

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