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Ligand · SYG

SYG · 2-[(1~{S})-1-azanylpropyl]phenol

SYG, 2-[(1~{S})-1-azanylpropyl]phenol (C9 H13 N O, 151.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
SYG
Formula
C9 H13 N O
Class
ligand
Structures
3
PDB entries
3

Binding sites

SYG in 3 structures; the first of them:

  • 5QY3 · Pandda analysis group deposition -- AAR2/RNASEH in complex with fragment F2X-entry B03A · SYG B401 · binds HIS48, ASN51, SER53, MET54, ASP75, GLY76
  • 5R09 · Pandda analysis group deposition -- AAR2/RNASEH in complex with fragment F2X-entry B03… · SYG B401 · binds HIS48, ASN51, SER53, MET54, ASP75, GLY76
  • 5RBP · Pandda analysis group deposition -- endothiapepsin changed state model for fragment… · SYG A401 · binds ILE10, ASP15, ASP81, SER115, PHE116, ASP119

Residues it binds most

ASP 3, SER 3, ASN 2, GLY 2, HIS 2, MET 2, ILE 1, PHE 1 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • SO4 · Sulfate ion
  • ACT · Acetate ion
  • DMS · Dimethyl sulfoxide
  • GOL · Glycerol
  • PG4 · Tetraethylene glycol
  • PGR · R-1,2-propanediol

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