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Ligand · SVB

SVB · N-(4-methylpiperazin-1-yl)-2-[(5Z)-4-oxo-2-thioxo-5-(2,3,6-trichlorobenzylidene)-1,3-thiazolidin-3-yl]acetamide

SVB, N-(4-methylpiperazin-1-yl)-2-[(5Z)-4-oxo-2-thioxo-5-(2,3,6-trichlorobenzylidene)-1,3-thiazolidin-3-yl]acetamide (C17 H17 Cl3 N4 O2 S2, 479.8 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
SVB
Formula
C17 H17 Cl3 N4 O2 S2
Class
ligand
Structures
2
PDB entries
1

Binding sites

SVB in 2 structures; the first of them:

  • 4PVO · Crystal Structure of VIM-2 metallo-beta-lactamase in complex with ML302 and ML302F · SVB A404 · binds PHE61, TYR67, PRO68, TRP87, ARG228, GLY232, ASN233, HIS263 and 2 more
  • 4PVO · Crystal structure of vim-2 metallo-beta-lactamase in complex with ML302 and ML302F · SVB A404 · binds PHE61, TYR67, PRO68, TRP87, ARG228, GLY232, ASN233, HIS263 and 2 more

Residues it binds most

GLY 2, ARG 2, ASN 2, ASP 2, HIS 2, PHE 2, PRO 2, TRP 2, TYR 2 (residue and the binding sites it lines).

Found with

  • S3C · (2Z)-2-sulfanyl-3-(2,3,6-trichlorophenyl)prop-2-enoic acid
  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide
  • FMT · Formic acid

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