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Ligand · SSU

SSU · Uridine-5'-phosphorothioate

SSU, Uridine-5'-phosphorothioate (C9 H13 N2 O8 P S, 340.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
SSU
Formula
C9 H13 N2 O8 P S
Class
ligand
Structures
2
PDB entries
2

Binding sites

SSU in 2 structures; the first of them:

  • 3AF6 · The crystal structure of an archaeal cpsf subunit, PH1404 from pyrococcus horikoshii… · SSU B1 · binds SSU2
  • 3IEM · Crystal structure of TTHA0252 from thermus thermophilus HB8 complexed with RNA analog · SSU G1 · binds ARG227, SER378, GLY379, HIS380, SSU2, SSU3

Residues it binds most

SSU 11, ARG 7, GLY 5, HIS 5, ASP 3, PHE 3, SER 4, THR 2, TYR 2, ASN 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • FLC · Citrate anion

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