GL1X · GenesisL1 explorer

Ligand · SLD

SLD · (3Z)-N-[(4E)-5-(4-{(5S)-5-[(acetylamino)methyl]-2-oxo-1,3-oxazolidin-3-yl}-2-fluorophenyl)pent-4-en-1-yl]-3-(4-methyl-2,6-dioxo-1,6-dihydropyrimidin-5(2H)-ylidene)propanamide

SLD, (3Z)-N-[(4E)-5-(4-{(5S)-5-[(acetylamino)methyl]-2-oxo-1,3-oxazolidin-3-yl}-2-fluorophenyl)pent-4-en-1-yl]-3-(4-methyl-2,6-dioxo-1,6-dihydropyrimidin-5(2H)-ylidene)propanamide (C25 H28 F N5 O6, 513.5 g/mol), in the MolNFT structures on…

Component
SLD
Formula
C25 H28 F N5 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

SLD in 2 structures; the first of them:

  • 3CXC · The structure of an enhanced oxazolidi inhibitor bound to the 50S ribosomal subunit of H.… · SLD 09500 · binds G2102, A2103, A2486, C2487, A2538, U2539, G2540, U2541 and 5 more
  • 3CXC · The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit… · SLD 09500 · binds G2102, A2103, A2486, C2487, A2538, U2539, G2540, U2541 and 5 more

Residues it binds most

A 2, U 2, C 2, G 2 (residue and the binding sites it lines).

Found with

  • CD · Cadmium ion
  • K · Potassium ion
  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion

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