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Ligand · SKO

SKO · N'-[6-[2-(6-azanyl-4-methyl-pyridin-2-yl)ethyl]pyridin-2-yl]-N,N'-dimethyl-ethane-1,2-diamine

SKO, N'-[6-[2-(6-azanyl-4-methyl-pyridin-2-yl)ethyl]pyridin-2-yl]-N,N'-dimethyl-ethane-1,2-diamine (C17 H25 N5, 299.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues…

Component
SKO
Formula
C17 H25 N5
Class
ligand
Structures
4
PDB entries
2

Binding sites

SKO in 4 structures; the first of them:

  • 4UGI · Structure of Bacillus subtilis Nitric Oxide Synthase in complex with… · SKO A904 · binds ARG65, HIS128, GLN129, PRO216, ILE218, MET221, PHE235, ASN236 and 7 more
  • 4UH0 · Structure of rat neuronal nitric oxide synthase heme domain in complex with… · SKO A800 · binds MET336, GLN478, PRO565, VAL567, ASN569, MET570, PHE584, SER585 and 7 more
  • 4UGI · Structure of bacillus subtilis nitric oxide synthase in complex with… · SKO A904 · binds ARG65, HIS128, GLN129, PRO216, ILE218, MET221, PHE235, ASN236 and 7 more
  • 4UH0 · Structure of rat neuronal nitric oxide synthase heme domain in complex with… · SKO A800 · binds MET336, GLN478, PRO565, VAL567, ASN569, MET570, PHE584, SER585 and 7 more

Residues it binds most

MET 6, TRP 6, TYR 6, ASN 6, GLN 6, GLU 6, GLY 6, PHE 6, PRO 6, SER 4 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • H4B · 5,6,7,8-tetrahydrobiopterin
  • ZN · Zinc ion
  • CL · Chloride ion
  • ACT · Acetate ion
  • GOL · Glycerol
  • IMD · Imidazole
  • POL · N-propanol

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