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Ligand · SK7

SK7 · 6-[3-hydroxy-2-(hydroxymethyl)prop-1-en-1-yl]-1,5-dimethylpyrimidine-2,4(1H,3H)-dione

SK7, 6-[3-hydroxy-2-(hydroxymethyl)prop-1-en-1-yl]-1,5-dimethylpyrimidine-2,4(1H,3H)-dione (C10 H14 N2 O4, 226.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within…

Component
SK7
Formula
C10 H14 N2 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

SK7 in 2 structures; the first of them:

  • 4JBX · Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with… · SK7 A601 · binds HIS58, GLU83, TRP88, ILE97, ILE100, TYR101, GLN125, MET128 and 6 more
  • 4JBX · Crystal structure of thymidine kinase from herpes simplex virus type 1 in complex with… · SK7 A601 · binds HIS58, GLU83, TRP88, ILE97, ILE100, TYR101, GLN125, MET128 and 6 more

Residues it binds most

TYR 4, ALA 4, ARG 4, ILE 4, GLN 4, GLU 4, HIS 4, MET 4, TRP 4, LYS 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol

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