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Ligand · SHD

SHD · alpha-D-altropyranose

SHD, alpha-D-altropyranose (C6 H12 O6, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
SHD
Formula
C6 H12 O6
Class
ligand
Structures
4
PDB entries
2

Binding sites

SHD in 4 structures; the first of them:

  • 3C5X · Crystal structure of the precursor membrane protein- envelope protein heterodimer from… · SHD D3
  • 7C6L · Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a… · SHD C2 · binds TRP41, PHE115, GLU117, ARG119, ARG177, HIS180, TRP255, SER297 and 1 more
  • 3C5X · Crystal structure of the precursor membrane protein- envelope protein heterodimer from… · SHD D3
  • 7C6L · Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a… · SHD C2 · binds TRP41, PHE115, GLU117, ARG119, ARG177, HIS180, TRP255, SER297 and 1 more

Residues it binds most

ARG 4, TRP 4, GLU 4, HIS 4, MET 4, PHE 4, SER 2, THR 2 (residue and the binding sites it lines).

Found with

  • Z6H · alpha-L-altropyranose
  • NA · Sodium ion
  • BMA · beta-D-mannopyranose
  • GLC · alpha-D-glucopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • NDG · 2-acetamido-2-deoxy-alpha-D-glucopyranose
  • CL · Chloride ion
  • CO2 · Carbon dioxide
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether

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