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Ligand · SD4

SD4 · N-hydroxy-L-asparagine

SD4, N-hydroxy-L-asparagine (C4 H8 N2 O4, 148.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
SD4
Formula
C4 H8 N2 O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

SD4 in 4 structures; the first of them:

  • 4DYO · Crystal Structure of Human Aspartyl Aminopeptidase (DNPEP) in complex with Aspartic acid… · SD4 A504 · binds HIS94, ASP264, GLU301, GLU302, ASP346, MET347, HIS349, LYS374 and 6 more
  • 4R4Y · Structural basis of a point mutation that causes the genetic disease… · SD4 A301 · binds TRP11, VAL145, HIS150, ASP151, THR152, THR170, ASP172, MET173 and 8 more
  • 4DYO · Crystal structure of human aspartyl aminopeptidase (dnpep) in complex with aspartic acid… · SD4 A504 · binds HIS94, ASP264, GLU301, GLU302, ASP346, MET347, HIS349, LYS374 and 6 more
  • 4R4Y · Structural basis of a point mutation that causes the genetic disease… · SD4 A301 · binds TRP11, VAL145, HIS150, ASP151, THR152, THR170, ASP172, MET173 and 8 more

Residues it binds most

ASP 4, HIS 4, THR 4, GLY 4, MET 4, GLU 2, ARG 2, LYS 2, SER 2, TRP 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • GOL · Glycerol

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