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Ligand · SCG

SCG · Secologanin

SCG, Secologanin (C17 H24 O10, 388.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
SCG
Formula
C17 H24 O10
Class
sugar
Structures
4
PDB entries
2

Binding sites

SCG in 4 structures; the first of them:

  • 2FPC · Structure of Strictosidine Synthase, the Biosynthetic Entry to the Monoterpenoid Indole… · SCG A1001 · binds TYR105, TRP149, ASP173, VAL176, PHE226, GLU271, MET276, HIS277 and 8 more
  • 3U5Y · Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity · SCG A1001 · binds GLN36, HIS140, TRP141, GLN186, THR189, HIS193, TYR200, THR275 and 9 more
  • 2FPC · Structure of strictosidine synthase, the biosynthetic entry to the monoterpenoid indole… · SCG A1001 · binds TYR105, TRP149, ASP173, VAL176, PHE226, GLU271, MET276, HIS277 and 8 more
  • 3U5Y · Structures of alkaloid biosynthetic glucosidases decode substrate specificity · SCG A1001 · binds GLN36, HIS140, TRP141, GLN186, THR189, HIS193, TYR200, THR275 and 9 more

Residues it binds most

GLU 8, TRP 8, HIS 8, PHE 8, TYR 8, GLN 4, THR 4, VAL 4, ASP 4, GLY 4 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion

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