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Ligand · S5J

S5J · 2-[4-(2-methoxyphenyl)piperazin-1-yl]ethanenitrile

S5J, 2-[4-(2-methoxyphenyl)piperazin-1-yl]ethanenitrile (C13 H17 N3 O, 231.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
S5J
Formula
C13 H17 N3 O
Class
ligand
Structures
3
PDB entries
2

Binding sites

S5J in 3 structures; the first of them:

  • 5SM5 · PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 NSP14 in complex with… · S5J D606 · binds ARG310, LYS311, GLN313, HIS314, ILE338, LYS339, CYS340, PRO342
  • 5RAQ · Pandda analysis group deposition -- crystal structure of JMJD1B in complex with FM001577A · S5J A1801 · binds SER1383, HIS1394, SER1418, VAL1598, ARG1602, HIS1606, GLU1608
  • 5SM5 · Pandda analysis group deposition -- crystal structure of SARS-cov-2 NSP14 in complex with… · S5J D606 · binds ARG310, LYS311, GLN313, HIS314, ILE338, LYS339, CYS340, PRO342

Residues it binds most

HIS 4, ARG 4, LYS 2, CYS 3, SER 2, GLN 2, GLU 2, ILE 2, PRO 2, VAL 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • PO4 · Phosphate ion
  • MN · Manganese (II) ion
  • CL · Chloride ion

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