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Ligand · S55

S55 · Methyl (2S,3R,4S)-3-ethyl-2-(beta-D-glucopyranosyloxy)-4-[(1S)-2,3,4,9-tetrahydro-1H-beta-carbolin-1-ylmethyl]-3,4-dihydro-2H-pyran-5-carboxylate

S55, Methyl (2S,3R,4S)-3-ethyl-2-(beta-D-glucopyranosyloxy)-4-[(1S)-2,3,4,9-tetrahydro-1H-beta-carbolin-1-ylmethyl]-3,4-dihydro-2H-pyran-5-carboxylate (C27 H36 N2 O9, 532.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records…

Component
S55
Formula
C27 H36 N2 O9
Class
ligand
Structures
4
PDB entries
2

Binding sites

S55 in 4 structures; the first of them:

  • 2JF6 · Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine · S55 A1509 · binds GLN57, HIS161, TRP162, ASN206, GLU207, THR210, PHE221, ASN273 and 13 more
  • 2V91 · Structure of strictosidine synthase in complex with strictosidine · S55 A1334 · binds TYR105, TRP149, TYR151, VAL167, ASP173, VAL176, VAL208, PRO209 and 16 more
  • 2JF6 · Structure of inactive mutant of strictosidine glucosidase in complex with strictosidine · S55 A1509 · binds GLN57, HIS161, TRP162, ASN206, GLU207, THR210, PHE221, ASN273 and 13 more
  • 2V91 · Structure of strictosidine synthase in complex with strictosidine · S55 A1334 · binds TYR105, TRP149, TYR151, VAL167, ASP173, VAL176, VAL208, PRO209 and 16 more

Residues it binds most

GLU 8, TRP 8, VAL 8, GLY 8, PHE 8, TYR 8, ASN 4, MET 8, HIS 8, LEU 8 (residue and the binding sites it lines).

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