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Ligand · S2D

S2D · N-benzoyl-D-alanine

S2D, N-benzoyl-D-alanine (C10 H11 N O3, 193.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
S2D
Formula
C10 H11 N O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

S2D in 2 structures; the first of them:

  • 2XD5 · Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae… · S2D A1792 · binds ALA459, SER460, LYS463, TYR498, SER516, ASN518, GLY653, THR654
  • 2XD5 · Structural insights into the catalytic mechanism and the role of streptococcus pneumoniae… · S2D A1792 · binds ALA459, SER460, LYS463, TYR498, SER516, ASN518, GLY653, THR654

Residues it binds most

THR 4, SER 4, LYS 4, TYR 4, ALA 4, ASN 4, GLY 4 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • SO4 · Sulfate ion

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