Ligand · RUD

RUD · [ethane6-3-(p-tolyl)propanoic acid]Ru(1,3,5-triaza-7-phosphaadamantane)Cl2

RUD, [ethane6-3-(p-tolyl)propanoic acid]Ru(1,3,5-triaza-7-phosphaadamantane)Cl2 (C16 H24 Cl2 N3 O2 P Ru, 493.3 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within…

Component: RUD
Formula: C16 H24 Cl2 N3 O2 P Ru
Class: ligand
Structures: 7
PDB entries: 4

Binding sites

RUD in 7 structures; the first of them:

5XF3 · Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane)… · RUD G201 · binds TYR57, ALA60, GLU61, GLU64, LEU65, VAL45
5XF4 · Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane)… · RUD G201 · binds TYR57, ALA60, GLU61, GLU64, LEU65, VAL45
5XF6 · Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane)… · RUD G202 · binds TYR57, ALA60, GLU61, GLU64, LEU65, VAL45
5XF3 · Nucleosome core particle with an adduct of a binuclear rapta (ru… · RUD G201 · binds TYR57, ALA60, GLU61, GLU64, LEU65, VAL45
5XF4 · Nucleosome core particle with an adduct of a binuclear rapta (ru… · RUD G201 · binds ALA60, GLU61, GLU64, VAL45
5XF5 · Nucleosome core particle with an adduct of a binuclear rapta (ru… · RUD G201 · binds ALA60, GLU61, GLU64, LEU65, VAL45
5XF6 · Nucleosome core particle with an adduct of a binuclear rapta (ru… · RUD G202 · binds ALA60, GLU61, GLU64, LEU65

Residues it binds most

GLU 14, ALA 7, HIS 6, LEU 6, VAL 6, LYS 5, TYR 4, ASP 1 (residue and the binding sites it lines).

Found with

MG · Magnesium ion
SO4 · Sulfate ion
EDN · Ethane-1,2-diamine
RRK · (1R,2R)-1,2-diphenylethane-1,2-diamine
SSK · (1S,2S)-1,2-diphenylethane-1,2-diamine
RSK · (1S,2R)-1,2-diphenylethane-1,2-diamine

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