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Ligand · RSH

RSH · 3-deoxy-D-lyxo-hexonic acid

RSH, 3-deoxy-D-lyxo-hexonic acid (C6 H12 O6, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
RSH
Formula
C6 H12 O6
Class
ligand
Structures
4
PDB entries
2

Binding sites

RSH in 4 structures; the first of them:

  • 1W3T · Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDGal… · RSH A1295 · binds PRO7, PHE39, GLY42, THR43, THR44, TYR130, TYR132, LYS155 and 5 more
  • 3NEV · Crystal structure of YagE, a prophage protein from E. coli K12 in complex with KDGal · RSH A1 · binds PRO20, PHE52, GLY55, SER56, GLY57, TYR145, PHE147, LYS174 and 7 more
  • 1W3T · Sulfolobus solfataricus 2-keto-3-deoxygluconate (kdg) aldolase complex with D-kdgal… · RSH A1295 · binds PRO7, PHE39, GLY42, THR43, THR44, TYR130, TYR132, LYS155 and 5 more
  • 3NEV · Crystal structure of yage, a prophage protein from E. COLI K12 in complex with kdgal · RSH A1 · binds PRO20, PHE52, GLY55, SER56, GLY57, TYR145, PHE147, LYS174 and 7 more

Residues it binds most

GLY 16, PHE 16, THR 16, TYR 16, LYS 16, PRO 16, SER 8, ALA 12, ILE 8, VAL 8 (residue and the binding sites it lines).

Found with

  • 3GR · D-Glyceraldehyde
  • PYR · Pyruvic acid
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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