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Ligand · RN9

RN9 · 3-[3-[[1-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2,5-bis(oxidanylidene)pyrrol-3-yl]amino]phenyl]-~{N}-(3-chloranyl-4-methyl-phenyl)propanamide

RN9, 3-[3-[[1-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2,5-bis(oxidanylidene)pyrrol-3-yl]amino]phenyl]-~{N}-(3-chloranyl-4-methyl-phenyl)propanamide (C25 H23 Cl N4 O5, 494.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
RN9
Formula
C25 H23 Cl N4 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

RN9 in 2 structures; the first of them:

  • 7LPS · Crystal structure of DDB1-CRBN-ALV1 complex bound to Helios (IKZF2 ZF2) · RN9 B502 · binds PHE102, VAL350, ASN351, PRO352, HIS353, GLU377, HIS378, SER379 and 10 more
  • 7LPS · Crystal structure of DDB1-crbn-ALV1 complex bound to helios (IKZF2 ZF2) · RN9 B502 · binds PHE102, VAL350, ASN351, PRO352, HIS353, GLU377, HIS378, SER379 and 9 more

Residues it binds most

HIS 8, TRP 8, CYS 8, PHE 8, ASN 8, GLN 7, GLU 8, GLY 8, PRO 8, SER 8 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion

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