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Ligand · RHD

RHD · Rhodium hexamine ion

RHD, Rhodium hexamine ion (H18 N6 Rh +3, 205.1 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
RHD
Formula
H18 N6 Rh +3
Class
ligand
Structures
7
PDB entries
4

Binding sites

RHD in 7 structures; the first of them:

  • 165D · The structure of a mispaired RNA double helix at 1.6 ångströms resolution and… · RHD A19 · binds C5, G6, G7, C8
  • 1ID9 · Structure of the hybrid RNA/DNA R-gcuucggc-D[F]U in presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8, G1, C2, U3
  • 1IDW · Structure of the hybrid RNA/DNA R-gcuucggc-D[CL]U in presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8
  • 1IHA · Structure of the Hybrid RNA/DNA R-GCUUCGGC-D[BR]U in Presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8
  • 1ID9 · Structure of the hybrid RNA/DNA R-gcuucggc-D[F]U in presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8, G1, C2, U3
  • 1IDW · Structure of the hybrid RNA/DNA R-gcuucggc-D[CL]U in presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8
  • 1IHA · Structure of the hybrid RNA/DNA R-gcuucggc-D[BR]U in presence of RH(NH3)6+++ · RHD A11 · binds C5, G6, G7, C8

Residues it binds most

C 10, G 10, U 3, BRU 1 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion

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