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Ligand · RF4

RF4 · (2-{[2-(2,6-dimethylphenoxy)ethyl]sulfanyl}-1H-benzimidazol-1-yl)acetic acid

RF4, (2-{[2-(2,6-dimethylphenoxy)ethyl]sulfanyl}-1H-benzimidazol-1-yl)acetic acid (C19 H20 N2 O3 S, 356.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
RF4
Formula
C19 H20 N2 O3 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

RF4 in 2 structures; the first of them:

  • 4XX9 · Crystal structure of PDK1 in complex with ATP and the PIF-pocket ligand RF4 · RF4 A402 · binds LYS76, LYS115, ILE118, ILE119, VAL124, VAL127, THR128, ARG131 and 6 more
  • 4XX9 · Crystal structure of PDK1 in complex with ATP and the pif-pocket ligand RF4 · RF4 A402 · binds LYS76, LYS115, ILE118, ILE119, VAL124, VAL127, THR128, ARG131 and 6 more

Residues it binds most

ILE 4, LEU 4, ARG 4, GLY 2, LYS 2, PHE 2, THR 2, VAL 2, GLN 2, TYR 2 (residue and the binding sites it lines).

Found with

  • ATP · Adenosine-5'-triphosphate
  • GOL · Glycerol

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