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Ligand · RE1

RE1 · Glycyl-L-A-aminopimelyl-E-(D-2-aminoethyl)phosphonate

RE1, Glycyl-L-A-aminopimelyl-E-(D-2-aminoethyl)phosphonate (C11 H21 N3 O7 P -1, 338.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
RE1
Formula
C11 H21 N3 O7 P -1
Class
ligand
Structures
2
PDB entries
1

Binding sites

RE1 in 2 structures; the first of them:

  • 1MPL · Crystal structure of phosphonate-inhibited D-ala-D-ala peptidase reveals an analog of a… · RE1 A400 · binds GLY61, SER62, LYS65, THR116, PHE120, ALA121, GLN122, THR123 and 16 more
  • 1MPL · Crystal structure of phosphonate-inhibited D-ala-D-ala peptidase reveals an analog of a… · RE1 A400 · binds GLY61, SER62, LYS65, THR116, PHE120, ALA121, GLN122, THR123 and 16 more

Residues it binds most

GLY 2, THR 2, ALA 2, ASN 2, GLN 2, SER 2, TYR 2, LEU 2, LYS 2, PHE 2 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol

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