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Ligand · RB3

RB3 · (1R)-3-{[(1R)-3-methoxy-1-methyl-3-oxopropyl]oxy}-1-methyl-3-oxopropyl (3R)-3-hydroxybutanoate

RB3, (1R)-3-{[(1R)-3-methoxy-1-methyl-3-oxopropyl]oxy}-1-methyl-3-oxopropyl (3R)-3-hydroxybutanoate (C13 H22 O7, 290.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues…

Component
RB3
Formula
C13 H22 O7
Class
ligand
Structures
4
PDB entries
2

Binding sites

RB3 in 4 structures; the first of them:

  • 2D81 · PHB depolymerase (S39A) complexed with R3HB trimer · RB3 A451 · binds ALA39, SER40, TYR43, TYR76, MET80, THR123, VAL124, HIS155 and 9 more
  • 4BTV · Structure of PhaZ7 PHB depolymerase in complex with 3HB trimer · RB3 A1345 · binds TYR105, TYR176, ALA177, PRO182, GLY185, SER186, GLN187, ASN188 and 5 more
  • 2D81 · Phb depolymerase (S39A) complexed with R3HB trimer · RB3 A451 · binds ALA39, SER40, TYR43, TYR76, MET80, THR123, VAL124, HIS155 and 9 more
  • 4BTV · Structure of PHAZ7 phb depolymerase in complex with 3HB trimer · RB3 A1345 · binds TYR105, TYR176, ALA177, PRO182, GLY185, SER186, GLN187, ASN188 and 5 more

Residues it binds most

TYR 6, GLY 4, SER 6, ALA 6, ASN 6, PRO 6, THR 6, CYS 2, GLN 4, PHE 4 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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