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Ligand · R40

R40 · N~2~-[(benzyloxy)carbonyl]-L-arginine

R40, N~2~-[(benzyloxy)carbonyl]-L-arginine (C14 H20 N4 O4, 308.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
R40
Formula
C14 H20 N4 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

R40 in 2 structures; the first of them:

  • 5IYY · X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand. · R40 A501 · binds TYR297, TRP301, THR316, ASP320, SER346, GLU348, THR349, LYS351 and 3 more
  • 5IYY · X-ray structure of neuropilin-1 B1 domain complexed with arg-4 ligand. · R40 A501 · binds TYR297, TRP301, THR316, ASP320, SER346, GLU348, THR349, LYS351 and 3 more

Residues it binds most

THR 4, TYR 4, ASP 4, GLU 4, GLY 4, ILE 4, LYS 4, SER 4, TRP 4 (residue and the binding sites it lines).

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