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Ligand · QOB

QOB · ~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-5-phenyl-pentanamide

QOB, ~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-5-phenyl-pentanamide (C26 H40 N4 O6, 504.6 g/mol), in the MolNFT…

Component
QOB
Formula
C26 H40 N4 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

QOB in 2 structures; the first of them:

  • 6ZP6 · Yeast 20S proteasome in complex with glidobactin-like natural product HB334 · QOB H901 · binds THR1, ARG19, SER20, THR21, GLN22, ALA27, LYS33, GLY45 and 12 more
  • 6ZP6 · Yeast 20S proteasome in complex with glidobactin-like natural product HB334 · QOB H901 · binds THR1, SER20, THR21, GLN22, LYS33, GLY47, THR48, ALA49 and 5 more

Residues it binds most

ALA 8, THR 8, GLY 8, PRO 8, SER 8, ASP 8, LYS 8, TYR 4, ARG 4, GLN 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion

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