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Ligand · QE8

QE8 · (1~{R},2~{R},3~{R},4~{S},5~{R})-4-[[(1~{S},2~{S},3~{S}, 4~{R},5~{R})-5-(hydroxymethyl)-2,3,4-tris(oxidanyl) cyclohexyl]oxymethyl]cyclohexane-1,2,3,5-tetrol

QE8, (1~{R},2~{R},3~{R},4~{S},5~{R})-4-[[(1~{S},2~{S},3~{S}, 4~{R},5~{R})-5-(hydroxymethyl)-2,3,4-tris(oxidanyl) cyclohexyl]oxymethyl]cyclohexane-1,2,3,5-tetrol (C14 H26 O9, 338.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
QE8
Formula
C14 H26 O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

QE8 in 2 structures; the first of them:

  • 6ZBM · Structure of the D125N mutant of the catalytic domain of the Bacillus circulans alpha-1,6… · QE8 A403 · binds TRP73, PHE122, ASP124, ASN125, TRP172, ASN181, CYS183, ASP228 and 6 more
  • 6ZBM · Structure of the D125N mutant of the catalytic domain of the bacillus circulans alpha-1,6… · QE8 A403 · binds TRP73, PHE122, ASP124, ASN125, TRP172, ASN181, CYS183, ASP228 and 3 more

Residues it binds most

ASN 2, ASP 2, TRP 2, CYS 2, PHE 2, TYR 2, ARG 1, LEU 1 (residue and the binding sites it lines).

Found with

  • MAN · alpha-D-mannopyranose
  • EDO · 1,2-ethanediol

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