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Ligand · Q4Z

Q4Z · [(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl sulfate

Q4Z, [(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl sulfate (C8 H13 N O8 S, 283.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
Q4Z
Formula
C8 H13 N O8 S
Class
ligand
Structures
2
PDB entries
2

Binding sites

Q4Z in 2 structures; the first of them:

  • 6Z14 · Structure of Bifidobacterium bifidum GH20 beta-N-beta-N-acetylhexosaminidase E553Q… · Q4Z JJJ1103 · binds ARG358, GLU387, HIS467, ASP552, TRP588, TRP607, TYR637, PRO639 and 5 more
  • 7DVB · A complex of a new GH20 enzyme from bacteroides thetaiotaomicron · Q4Z A601 · binds ARG171, HIS270, ASN335, GLU336, TRP389, TRP409, GLN431, TYR435 and 5 more

Residues it binds most

TRP 5, GLU 5, ARG 5, GLN 5, ASN 4, HIS 5, TYR 5, ASP 1, PRO 1, VAL 1 (residue and the binding sites it lines).

Found with

  • NGS · 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose
  • NA · Sodium ion
  • NO3 · Nitrate ion
  • B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol

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